#!/bin/bash
set -e

pkg=jalview

export LC_ALL=C.UTF-8
if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
  # Double quote below to expand the temporary directory variable now versus
  # later is on purpose.
  # shellcheck disable=SC2064
  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
fi

TEMP_HOME=$(mktemp -d)

cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"

cd "${AUTOPKGTEST_TMP}"

HOME="${TEMP_HOME}" jalview -nodisplay -open uniref50.fa -eps uniref50_out.eps
echo "Output generated in eps format in $(pwd)/uniref50_out.eps"

HOME="${TEMP_HOME}" jalview -nodisplay -open uniref50.fa -html uniref50_out.html
echo "Output generated in html format in $(pwd)/uniref50_out.html"

HOME="${TEMP_HOME}" jalview -nodisplay -open uniref50.fa -png uniref50_out.png
echo "Output generated in png format in $(pwd)/uniref50_out.png"
